STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atad2bATPase family AAA domain containing 2B. (1449 aa)    
Predicted Functional Partners:
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.819
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 0.797
psmd2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
   
 0.795
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 0.795
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.791
LOC100701093
Adhesion regulating molecule 1.
   
 0.787
Psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.781
LOC100706559
Proteasome 26S subunit, non-ATPase 11b.
   
 0.766
LOC100703712
PCI domain-containing protein.
   
 0.766
I3KUR8_ORENI
Proteasome 26S subunit, non-ATPase 4a.
   
 0.758
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.