Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700263Major facilitator superfamily domain containing 2B. (609 aa)    
Predicted Functional Partners:
Pcmt1
Protein-L-isoaspartate O-methyltransferase.
      
 0.627
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.576
LOC100702922
Protein-L-isoaspartate O-methyltransferase.
      
 0.576
tyms
Thymidylate synthetase.
    
  0.551
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.550
Tk1
Thymidine kinase.
     
  0.535
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
  0.515
svopl
SVOP-like.
      
 0.493
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.476
Sass6
SAS-6 centriolar assembly protein.
      
 0.468
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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