STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700263Major facilitator superfamily domain containing 2B. (609 aa)    
Predicted Functional Partners:
tyms
Thymidylate synthetase.
    
  0.593
mfsd13a
Major facilitator superfamily domain containing 13A.
      
 0.567
mfsd11
Major facilitator superfamily domain containing 11.
      
 0.549
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.516
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.491
svopl
SVOP-like.
      
 0.483
mfsd5
Major facilitator superfamily domain containing 5.
   
  
 0.471
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 0.469
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.467
LOC100696823
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.467
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.