STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692950Peptidylprolyl isomerase. (109 aa)    
Predicted Functional Partners:
I3IY44_ORENI
WD repeat domain 92.
   
 0.808
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.777
ENSONIP00000032100
Calmodulin 2a (phosphorylase kinase, delta).
   
 0.719
ENSONIP00000045107
annotation not available
   
 0.719
ENSONIP00000050053
annotation not available
   
 0.719
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.719
LOC100709030
Ryanodine receptor 1b (skeletal).
    
 0.704
Ryr3
Ryanodine receptor 3.
    
 0.704
RYR3
Ryanodine receptor 3.
    
 0.704
RYR2
Uncharacterized protein.
    
 0.704
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.