STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myoz1Myozenin 1. (314 aa)    
Predicted Functional Partners:
LOC100703845
Si:rp71-17i16.4.
   
  
 0.838
Myot
Myotilin isoform X2.
   
  
 0.807
tcap
Titin-cap (telethonin).
   
 
 0.750
ampd1
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.731
LOC100709026
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
  
 0.729
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
  
 0.729
actn3
Actinin alpha 3b.
   
 
 0.708
LOC100696265
Actinin, alpha 1.
   
 
 0.708
LOC100702502
Actinin, alpha 2b.
   
 
 0.708
ACTN4
Actinin alpha 4.
   
 
 0.708
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.