Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700453Si:dkey-208k4.2. (373 aa)    
Predicted Functional Partners:
sbspon
Somatomedin B and thrombospondin type 1 domain containing.
    
 
 0.735
bdp1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.714
gtf3c1
General transcription factor IIIC subunit 1.
    
 0.688
I3KV70_ORENI
B-block_TFIIIC domain-containing protein.
    
 0.688
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 0.659
LOC100698875
Uncharacterized protein.
   
 0.659
POC1A
POC1 centriolar protein A.
    
 0.652
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.647
gtf3c5
General transcription factor IIIC, polypeptide 5.
    
 0.609
polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.597
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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