Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100702431Si:ch211-197l9.5. (770 aa)    
Predicted Functional Partners:
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
  0.810
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
  0.810
chaf1b
Chromatin assembly factor 1, subunit B.
      
 0.672
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.659
ZBTB21
Zinc finger and BTB domain containing 21.
    
 0.659
mis18a
MIS18 kinetochore protein A.
   
  
 0.583
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.548
vps26c
VPS26 endosomal protein sorting factor C.
      
 0.534
scaf4
SR-related CTD-associated factor 4a.
      
 0.519
urb1
URB1 ribosome biogenesis homolog.
      
 0.504
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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