Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703242Im:7142702. (837 aa)    
Predicted Functional Partners:
LOC100691722
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
     
 0.687
smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
     
 0.687
LOC100693961
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
    
 0.660
smarcc2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
    
 0.660
smarcc1
Uncharacterized protein.
    
 0.660
smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
    
  0.659
I3KNN9_ORENI
Uncharacterized protein.
    
  0.659
LOC100699288
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
  0.659
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
     
 0.631
I3KDT0_ORENI
BAF chromatin remodeling complex subunit BCL7A.
   
 
 0.624
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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