I3IXN8_ORENI protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I3IXN8_ORENI

Exocyst complex component 3-like 2b. (925 aa)

Predicted Functional Partners:

Exoc5

0.943

I3JGS7_ORENI

0.930

exoc8

0.929

exoc7

0.927

exoc4

0.922

I3J486_ORENI

0.918

I3IVA0_ORENI

0.872

exoc6

0.872

exoc1l

0.607

Stxbp6

0.578

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Exoc5	I3IVA0_ORENI	ENSONIP00000055355	ENSONIP00000000540	Exocyst complex component 5.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.981
Exoc5	I3IXN8_ORENI	ENSONIP00000055355	ENSONIP00000001378	Exocyst complex component 5.	Exocyst complex component 3-like 2b.	0.943
Exoc5	I3J486_ORENI	ENSONIP00000055355	ENSONIP00000003676	Exocyst complex component 5.	Exocyst complex component 1.	0.999
Exoc5	I3JGS7_ORENI	ENSONIP00000055355	ENSONIP00000008068	Exocyst complex component 5.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.999
Exoc5	Stxbp6	ENSONIP00000055355	ENSONIP00000058887	Exocyst complex component 5.	Syntaxin-binding protein 6 isoform X1.	0.737
Exoc5	exoc1l	ENSONIP00000055355	ENSONIP00000011076	Exocyst complex component 5.	Si:dkey-245p14.4.	0.873
Exoc5	exoc4	ENSONIP00000055355	ENSONIP00000079357	Exocyst complex component 5.	Exocyst complex component 4.	0.999
Exoc5	exoc6	ENSONIP00000055355	ENSONIP00000043591	Exocyst complex component 5.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.981
Exoc5	exoc7	ENSONIP00000055355	ENSONIP00000022773	Exocyst complex component 5.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.999
Exoc5	exoc8	ENSONIP00000055355	ENSONIP00000023053	Exocyst complex component 5.	Exocyst complex component 8.	0.999
I3IVA0_ORENI	Exoc5	ENSONIP00000000540	ENSONIP00000055355	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 5.	0.981
I3IVA0_ORENI	I3IXN8_ORENI	ENSONIP00000000540	ENSONIP00000001378	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 3-like 2b.	0.872
I3IVA0_ORENI	I3J486_ORENI	ENSONIP00000000540	ENSONIP00000003676	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 1.	0.982
I3IVA0_ORENI	I3JGS7_ORENI	ENSONIP00000000540	ENSONIP00000008068	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.982
I3IVA0_ORENI	Stxbp6	ENSONIP00000000540	ENSONIP00000058887	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Syntaxin-binding protein 6 isoform X1.	0.749
I3IVA0_ORENI	exoc1l	ENSONIP00000000540	ENSONIP00000011076	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Si:dkey-245p14.4.	0.787
I3IVA0_ORENI	exoc4	ENSONIP00000000540	ENSONIP00000079357	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 4.	0.980
I3IVA0_ORENI	exoc6	ENSONIP00000000540	ENSONIP00000043591	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.547
I3IVA0_ORENI	exoc7	ENSONIP00000000540	ENSONIP00000022773	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.980
I3IVA0_ORENI	exoc8	ENSONIP00000000540	ENSONIP00000023053	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 8.	0.981