STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnh4Potassium voltage-gated channel, subfamily H (eag-related), member 4a. (1186 aa)    
Predicted Functional Partners:
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
      
 0.700
gramd1b
GRAM domain containing 1Bb.
      
 0.608
Thsd7b
Thrombospondin, type I, domain containing 7Ba.
   
  
 0.490
plce1
Phospholipase C, epsilon 1.
   
  
 0.488
phrf1
PHD and ring finger domains 1.
      
 0.480
ENSONIP00000034919
Potassium voltage-gated channel subfamily H member 1-like.
 
   
 0.443
LOC100696040
Aldo_ket_red domain-containing protein.
    
 0.429
LOC100709904
Voltage-gated potassium channel subunit beta-2.
    
 0.429
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.429
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.429
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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