STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnh4Potassium voltage-gated channel, subfamily H (eag-related), member 4a. (1186 aa)    
Predicted Functional Partners:
plekhg5
Pleckstrin homology domain containing, family G (with RhoGef domain) member 5b.
      
 0.730
gramd1b
GRAM domain containing 1Bb.
      
 0.709
ENSONIP00000034919
Potassium voltage-gated channel subfamily H member 1-like.
 
  
 0.600
Thsd7b
Thrombospondin, type I, domain containing 7Ba.
      
 0.552
LOC100696040
Aldo_ket_red domain-containing protein.
     
 0.512
LOC100709904
Voltage-gated potassium channel subunit beta-2.
     
 0.512
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
     
 0.512
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
     
 0.512
LOC100691500
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
     
 0.512
kcng1
Potassium voltage-gated channel, subfamily G, member 1; Belongs to the potassium channel family.
   
 
 0.510
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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