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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703696Phosphoinositide phospholipase C. (1214 aa)    
Predicted Functional Partners:
LOC100708685
Pro-melanin-concentrating hormone, like.
   
 
 0.824
LOC100710151
Pro-melanin concentrating hormone.
   
 
 0.824
hcrtr2
Hypocretin (orexin) receptor 2.
   
 0.787
LOC100534576
Preproghrelin.
     
 0.652
trh
Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.
     
 0.647
tac1
Tachykinin 1.
     
 0.593
nts
Neurotensin.
     
 0.561
LOC100708704
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
   
 
 0.549
nmu
Neuromedin U.
     
 0.538
LOC100712192
Melanin-concentrating hormone receptor 2; Belongs to the G-protein coupled receptor 1 family.
    
 0.532
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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