Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP128Centrosomal protein 128. (1044 aa)    
Predicted Functional Partners:
cep104
Centrosomal protein 104.
      
 0.891
inka2
PAK4-inhibitor INKA2.
  
 
   0.801
Cep63
Centrosomal protein 63.
   
 
 0.765
cfap58
Cilia and flagella associated protein 58.
    
 
 0.762
sclt1
Sodium channel and clathrin linker 1.
    
 0.758
WDR63
WD repeat domain 63.
    
 0.730
cep350
Centrosomal protein 350.
   
  
 0.730
nin
Thyroid receptor-interacting protein 11-like.
   
  
 0.716
I3IXR1_ORENI
Neurexin 3b.
      
 0.710
cep89
Centrosomal protein 89.
      
 0.681
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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