Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb5Ankyrin repeat and SOCS box containing 5a. (332 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.815
LOC100703753
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.745
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.745
I3JU14_ORENI
Elongin B.
    
 0.703
elob
Ubiquitin-like domain-containing protein.
    
 0.703
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.690
LOC100703741
Myomesin 2a.
   
 0.641
lrrc20
Leucine rich repeat containing 20.
    
 0.640
lrrc38
Leucine rich repeat containing 38b.
    
 0.636
neurl2
Neuralized E3 ubiquitin protein ligase 2.
    
 0.632
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.