STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ctsoCathepsin O; Belongs to the peptidase C1 family. (368 aa)    
Predicted Functional Partners:
bcl2l1
BCL2 like 1.
     
 0.919
I3KLZ9_ORENI
X-linked inhibitor of apoptosis.
     
 0.919
LOC100700270
BH4_2 domain-containing protein.
     
 0.919
LOC100705328
Baculoviral IAP repeat containing 2.
     
 0.917
LOC100709346
Baculoviral IAP repeat containing 5b.
     
  0.916
I3KLB2_ORENI
Uncharacterized protein.
     
  0.916
LOC100709661
Baculoviral IAP repeat containing 5a.
     
  0.916
ENSONIP00000075325
annotation not available
     
  0.915
LOC100696456
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.866
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.866
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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