Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps5Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (438 aa)    
Predicted Functional Partners:
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
mrps7
Mitochondrial ribosomal protein S7.
  
 0.999
Mrps31
Mitochondrial ribosomal protein S31.
   
 0.999
dap3
Death associated protein 3.
   
 0.999
mrps35
Mitochondrial ribosomal protein S35.
   
 0.999
mrps14
Mitochondrial ribosomal protein S14.
  
 0.999
Mrps6
Mitochondrial ribosomal protein S6.
   
 0.999
mrps26
Mitochondrial ribosomal protein S26.
   
  0.999
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
mrps16
Mitochondrial ribosomal protein S16.
   
 0.999
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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