Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tpgs1Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
ttll1
Tubulin tyrosine ligase-like family, member 1.
    
 0.990
nicn1
Nicolin 1.
    
 0.989
lg7h11orf49
Zgc:92873.
    
 
 0.986
Tpgs2
Tubulin polyglutamylase complex subunit 2.
    
 0.954
catip
Ciliogenesis associated TTC17 interacting protein.
      
 0.923
ttc13
Tetratricopeptide repeat domain 13.
      
 0.923
lrrc49
Leucine-rich repeat-containing protein 49 isoform X1.
    
 0.903
ENSONIP00000061924
Leucine-rich repeat-containing protein 49.
    
 0.903
I3KBZ3_ORENI
F-box and leucine-rich repeat protein 13.
   
  
 0.900
I3IW98_ORENI
Adenylate kinase 8; Belongs to the adenylate kinase family.
      
 0.790
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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