STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxn3Checkpoint suppressor 1. (486 aa)    
Predicted Functional Partners:
men1
Multiple endocrine neoplasia I.
    
 0.522
snw1
SNW domain containing 1.
    
 0.507
hdac3
Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
    
 0.480
LOC100704864
Forkhead box K2.
   
 
0.459
LOC100708764
Uncharacterized protein.
   
 
0.459
Foxk1
Forkhead box K1.
   
 
0.458
Foxi3
Forkhead box I2.
  
 
0.431
sin3a
SIN3 transcription regulator family member Aa.
    
 0.419
sin3b
SIN3 transcription regulator family member B.
    
 0.419
LOC100694434
SIN3 transcription regulator family member Ab.
    
 0.419
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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