Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3IXY0_ORENISLIT and NTRK-like family, member 3b. (907 aa)    
Predicted Functional Partners:
PTPRD
Uncharacterized protein.
    
 0.899
PTPRD-2
Protein tyrosine phosphatase receptor type D.
    
 0.899
slitrk6
SLIT and NTRK-like family, member 6.
   
 
  0.839
SLITRK1
SLIT and NTRK like family member 1.
   
 
  0.830
Slitrk4
SLIT and NTRK-like family, member 4.
   
 
  0.811
D2hgdh
D-2-hydroxyglutarate dehydrogenase.
      
 0.672
LOC100694711
Protein tyrosine phosphatase receptor type Fa.
    
 0.629
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.629
LOC100702908
Protein tyrosine phosphatase receptor type Sa.
    
 0.629
I3JVL4_ORENI
Protein-tyrosine-phosphatase.
    
 0.629
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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