STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100693510Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily. (370 aa)    
Predicted Functional Partners:
ENSONIP00000072373
annotation not available
 
  
  0.823
I3JEK7_ORENI
Uncharacterized protein.
 
  
  0.817
ENSONIP00000075361
annotation not available
 
  
  0.812
ENSONIP00000053540
annotation not available
 
  
  0.761
LOC100705949
Uncharacterized protein.
 
   
  0.745
ENSONIP00000069869
annotation not available
 
  
  0.743
LOC100700172
DH domain-containing protein.
 
   
  0.733
Nme5
Nucleoside diphosphate kinase homolog 5 isoform X2.
    
 
 0.567
I3KXA2_ORENI
Uncharacterized protein.
 
  
  0.532
chp1
Calcineurin-like EF-hand protein 1.
    
 0.522
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.