STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MeiocMeiosis-specific coiled-coil domain-containing protein MEIOC. (215 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 
 0.727
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.592
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.545
rbm46
RNA binding motif protein 46.
      
 0.491
I3KB41_ORENI
REC8 meiotic recombination protein b.
     
 0.473
ENSONIP00000076426
Meiotic recombination protein REC8 homolog isoform X1.
     
 0.473
Nepro
Nucleolus and neural progenitor protein.
      
 0.457
ythdc1
YTH domain containing 1.
    
 
 0.453
LOC100712156
Olfactory receptor.
      
 0.444
LOC100710134
RAD21 cohesin complex component a.
     
 0.443
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.