STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707257Tudor domain containing 6. (2164 aa)    
Predicted Functional Partners:
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.907
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.860
I3KW58_ORENI
Tudor domain containing 9.
   
0.700
I3JWW9_ORENI
Tudor domain containing 12.
    
 0.666
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.567
tdrkh
Mbt domain containing 1.
   
0.535
e2f1
E2F transcription factor 1.
    
   0.506
LOC100709487
Spermatogenesis-associated protein 6.
      
 0.492
LOC100691039
Testis expressed 2.
      
 0.480
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
      
 0.452
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.