Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pno1Partner of NOB1 homolog. (252 aa)    
Predicted Functional Partners:
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.999
bysl
Bystin-like.
   
 0.998
tsr1
TSR1 ribosome maturation factor.
   
 0.983
Ltv1
LTV1 ribosome biogenesis factor.
   
 0.974
riok2
RIO kinase 2 (yeast).
   
 0.957
riok1
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 0.947
I3KZE4_ORENI
Apoptosis antagonizing transcription factor.
   
 
 0.942
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.937
LOC100701316
UTP14C small subunit processome component.
   
 
 0.933
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.931
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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