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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem144Transmembrane protein 144b. (395 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192 isoform X1.
      
 0.659
nsg2
Neuronal vesicle trafficking associated 2.
      
 0.653
TMEM19
Transmembrane protein 19.
      
 0.652
slc35b3
Solute carrier family 35 member B3.
      
 0.606
rtraf
RNA transcription, translation and transport factor.
      
 0.572
ENSONIP00000036220
RNA transcription, translation and transport factor protein-like.
      
 0.572
LOC102081410
Solute carrier family 30 (zinc transporter), member 1.
   
  
 0.457
slc30a1
Solute carrier family 30 member 1a.
   
  
 0.457
slc35e4
Solute carrier family 35 member E4.
      
 0.425
nipa2
NIPA magnesium transporter 2.
      
 0.415
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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