STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fbxo16F-box protein 16. (364 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.962
dcp2
M7GpppN-mRNA hydrolase isoform X1.
    
   0.902
fbxl16
F-box and leucine-rich repeat protein 16.
    
 0.779
edc4
Enhancer of mRNA decapping 4.
   
   0.774
fbxl6
F-box domain-containing protein.
   
 0.673
ENSONIP00000080785
Uncharacterized protein LOC100694865.
   
 0.673
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.651
denr
Density-regulated protein; Belongs to the DENR family.
      
 0.639
rnf7
Ring finger protein 7.
    
 0.638
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.638
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.