STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdpcpWD repeat containing planar cell polarity effector. (740 aa)    
Predicted Functional Partners:
cplane2
Ciliogenesis and planar polarity effector 2.
    
 
 0.799
intu
Inturned planar cell polarity protein.
   
 
 0.760
tbc1d32
TBC1 domain family, member 32.
   
  
 0.721
cdc20
Cell division cycle 20 homolog.
   
 
 0.644
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 
 0.644
I3KQQ3_ORENI
Fizzy/cell division cycle 20 related 1b.
   
 
 0.644
ENSONIP00000057827
Cell division cycle protein 20 homolog B isoform X1.
   
 
 0.644
LOC100694127
WD_REPEATS_REGION domain-containing protein.
   
 
 0.644
Pdcd2l
Programmed cell death 2-like.
    
 
 0.631
pdcd2
Programmed cell death 2.
    
 
 0.631
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.