Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
wdpcpWD repeat containing planar cell polarity effector. (740 aa)    
Predicted Functional Partners:
cplane2
Ciliogenesis and planar polarity effector 2.
    
 
 0.977
LOC100698862
CASP2 and RIPK1 domain containing adaptor with death domain.
   
    0.958
tbc1d32
TBC1 domain family, member 32.
   
  
 0.913
intu
Inturned planar cell polarity protein.
   
 
 0.842
CTXN2
Cortexin 2.
   
    0.769
bbs12
Bardet-Biedl syndrome 12.
      
 0.749
mks1
MKS transition zone complex subunit 1.
      
 0.723
bbs10
Uncharacterized protein; Belongs to the TCP-1 chaperonin family.
      
 0.709
cdc20
Cell division cycle 20 homolog.
   
 
 0.707
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 
 0.707
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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