Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ankef1Ankyrin repeat and EF-hand domain containing 1a. (688 aa)    
Predicted Functional Partners:
cfap20
Cilia and flagella associated protein 20.
    
 
 0.863
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.761
ficd
FIC domain containing.
      
 0.736
efhc2
EF-hand domain (C-terminal) containing 2.
   
   0.682
Efhc1
EF-hand domain (C-terminal) containing 1.
   
   0.682
rsph3
Radial spoke head 3.
   
  0.677
ppil6
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.676
ppp1r32
Protein phosphatase 1, regulatory subunit 32.
    
 
 0.672
dnai2
Dynein, axonemal, intermediate chain 2b.
    
  0.670
WDR63
WD repeat domain 63.
    
  0.670
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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