STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708001Zgc:85932; Belongs to the peptidase C2 family. (702 aa)    
Predicted Functional Partners:
cast
Calpastatin isoform X5.
    
 0.543
ENSONIP00000000682
Intersectin 2a.
   
 
  0.538
I3KKD0_ORENI
Intersectin 2b.
   
 
  0.538
ENSONIP00000017143
Myelin-associated glycoprotein.
      
 0.485
LOC102075866
Ig-like domain-containing protein.
      
 0.485
LOC102076235
Uncharacterized protein.
      
 0.485
ENSONIP00000027045
Myelin-associated glycoprotein.
      
 0.485
I3J3I6_ORENI
Ig-like domain-containing protein.
      
 0.485
LOC100693751
Uncharacterized protein.
      
 0.485
LOC102081984
Myelin-associated glycoprotein.
      
 0.485
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.