Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100708867EMILIN-1. (1023 aa)    
Predicted Functional Partners:
LOC100702538
Zgc:154055.
    
   0.762
mtmr9
Myotubularin related protein 9.
    
   0.762
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
    
  0.558
Svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 0.555
LOC100689735
Zgc:103625.
      
 0.509
wnt4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.454
Fut11
Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family.
     
  0.448
khk
Ketohexokinase.
      
 0.418
uso1
USO1 vesicle transport factor.
     
 0.417
LOC100695496
Uncharacterized protein LOC100695496 isoform X2.
      
 0.409
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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