STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707701Beta-1,3-N-acetylglucosaminyltransferase. (373 aa)    
Predicted Functional Partners:
LOC100703553
Notch receptor 1a.
    
 0.949
notch1
Notch receptor 1b.
    
 0.949
LOC100698688
Notch receptor 2.
    
 0.944
LOC100696073
Notch receptor 3.
    
 0.943
LOC100708834
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
     
  0.916
Rfng
Beta-1,3-N-acetylglucosaminyltransferase radical fringe.
     
  0.916
LOC100697735
Beta-1,3-N-acetylglucosaminyltransferase.
     
  0.894
b3gnt9
Hexosyltransferase.
    
 0.705
LOC100699669
Hexosyltransferase.
    
 0.703
chpf
Hexosyltransferase.
      
 0.702
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.