STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3IYG0_ORENIProminin 1a. (896 aa)    
Predicted Functional Partners:
LOC100700919
Homeobox domain-containing protein.
      
 0.639
LOC100692879
Fibroblast growth factor binding protein 1b.
      
 0.625
PARD3
Par-3 family cell polarity regulator.
      
 0.523
Pax6
Paired box 6b.
      
 0.500
Mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
      
 0.489
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
      
 0.489
ifngr1l
Fibronectin type-III domain-containing protein.
      
 0.451
ipo11
Importin 11.
      
 0.444
mtf1
Metal-regulatory transcription factor 1.
      
 0.444
slc25a16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.444
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.