Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wipf1WAS/WASL interacting protein family, member 1a. (510 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
    
 0.980
LOC100711937
WASP like actin nucleation promoting factor a.
   
 0.978
I3K140_ORENI
WASP like actin nucleation promoting factor b.
   
 0.978
was
Uncharacterized protein.
   
 0.978
nck1
Cytoplasmic protein.
    
 0.926
nck2
Cytoplasmic protein.
    
 0.926
ENSONIP00000005762
WAS/WASL-interacting protein family member 3.
    
 0.924
cdc42
Cell division cycle 42.
   
 0.892
LOC100701852
WAS/WASL interacting protein family, member 2a.
     
 0.869
LOC100696870
WAS/WASL-interacting protein family member 2.
     
 0.869
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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