Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem33Transmembrane protein 33. (248 aa)    
Predicted Functional Partners:
BEND4
BEN domain containing 4.
      
 0.755
cfap299
Cilia and flagella associated protein 299.
      
 0.701
LOC100705945
Uncharacterized protein LOC100705945.
    
 
 0.683
slc30a9
Solute carrier family 30 member 9.
   
  
 0.680
rnf26
Ring finger protein 26.
    
 
 0.679
nup133
Nucleoporin 133.
    
 
 0.653
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
  
 0.642
SCYL1
SCY1 like pseudokinase 1.
   
  
 0.634
TMEM43
Uncharacterized protein.
    
 
 0.627
pop1
POP1 homolog, ribonuclease P/MRP subunit.
     
  0.612
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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