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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem33Transmembrane protein 33. (248 aa)    
Predicted Functional Partners:
LOC100705945
Uncharacterized protein LOC100705945.
    
 
 0.656
slc30a9
Solute carrier family 30 member 9.
 
 
  
 0.619
Sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
      
 0.588
nup133
Nucleoporin 133.
    
 
 0.583
BEND4
BEN domain containing 4.
      
 0.582
cfap299
Cilia and flagella associated protein 299.
      
 0.577
rnf26
Ring finger protein 26.
    
 
 0.560
mvp
Major vault protein.
      
 0.548
ahctf1
Protein ELYS.
      
 0.521
TMEM43
Uncharacterized protein.
      
 0.508
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.