STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KUL4_ORENIMyocardin related transcription factor Ab. (508 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.825
I3JWF9_ORENI
MADS-box domain-containing protein.
    
 0.825
I3KVH4_ORENI
Uncharacterized protein.
   
 0.664
ENSONIP00000036272
annotation not available
   
 0.664
I3KNP1_ORENI
Uncharacterized protein.
   
 0.664
LOC100700713
SH3 and multiple ankyrin repeat domains 3a.
   
 0.664
shank2
SH3 and multiple ankyrin repeat domains 2a.
   
 0.664
Shank1
SH3 and multiple ankyrin repeat domains protein 1 isoform X1.
   
 0.664
STK38
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.561
stk38l
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.561
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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