Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3IYW8_ORENIRunt domain-containing protein. (290 aa)    
Predicted Functional Partners:
cbfb
Core-binding factor subunit beta.
    
 0.936
yap1
Yes-associated protein 1.
    
 0.786
spi1
Spi-1 proto-oncogene b.
   
 0.753
LOC109194259
T-cell acute lymphocytic leukemia 1.
    
 0.709
ENSONIP00000035341
T-cell acute lymphocytic leukemia protein 1 homolog.
    
 0.709
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.682
LOC100699888
STIP1 homology and U-Box containing protein 1.
    
 0.682
gata3
GATA binding protein 3.
    
 0.677
GATA2
GATA binding protein 2.
    
 0.677
LOC100705840
GATA binding protein 2a.
    
 0.677
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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