Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
leprotl1Leptin receptor overlapping transcript like 1. (131 aa)    
Predicted Functional Partners:
Tmem50a
Transmembrane protein 50A.
   
 
 0.872
TMEM50B
Transmembrane protein 50B.
   
 
 0.872
lepr
Uncharacterized protein.
    
 
 0.741
wdr74
WD repeat domain 74.
      
 0.726
plekhs1
Pleckstrin homology domain-containing family S member 1 isoform X1.
      
 0.679
tcaim
T cell activation inhibitor, mitochondrial.
      
 0.502
Tut1
Terminal uridylyl transferase 1, U6 snRNA-specific.
      
 0.495
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
      
 0.492
lrrc40
Leucine rich repeat containing 40.
      
 0.479
Smim12
Small integral membrane protein 12 isoform X3.
      
 0.479
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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