Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc24Uncharacterized protein. (533 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.659
asmtl
Acetylserotonin O-methyltransferase-like.
  
 
  0.608
bbs9
Bardet-Biedl syndrome 9.
    
 0.566
ints13
Integrator complex subunit 13.
   
 0.550
ints1
Integrator complex subunit 1.
    
 0.538
bbs7
Bardet-Biedl syndrome 7.
    
 0.538
ttc8
Tetratricopeptide repeat domain 8.
    
 0.515
ints11
Integrator complex subunit 11.
   
 0.512
ints10
Integrator complex subunit 10.
    
 0.505
Tep1
Telomerase protein component 1 isoform X1.
    
 0.504
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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