Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
lsrLipolysis stimulated lipoprotein receptor. (625 aa)    
Predicted Functional Partners:
LOC100707214
Junction plakoglobin a.
   
  
 0.631
LOC100701331
Uncharacterized protein.
   
  
 0.630
mvp
Major vault protein.
      
 0.603
LOC100707970
Retinoic acid receptor, gamma b.
      
 0.480
RARG
Retinoic acid receptor gamma a.
      
 0.477
Cog2
Component of oligomeric golgi complex 2.
      
 0.464
cog1
Component of oligomeric golgi complex 1.
      
 0.464
I3JQ63_ORENI
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.464
Pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
     
 0.454
LOC100709536
Occludin a.
   
  
 0.450
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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