STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692568Cyclin E2; Belongs to the cyclin family. (397 aa)    
Predicted Functional Partners:
rb1
Retinoblastoma 1.
   
 0.983
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.982
rbl1
Retinoblastoma-like 1 (p107).
   
 0.980
LOC100692495
Retinoblastoma-like 2 (p130).
   
 0.980
cdkn1b
Cyclin-dependent kinase inhibitor 1Bb.
   
 0.976
LOC100711644
Cyclin-dependent kinase inhibitor 1Cb.
   
 0.976
LOC100698501
Uncharacterized protein.
   
 0.976
LOC102082412
Cyclin-dependent kinase inhibitor 1A.
   
 0.976
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.976
ENSONIP00000041766
Cyclin-dependent kinase inhibitor 1B.
   
 0.976
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.