STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000001878annotation not available (597 aa)    
Predicted Functional Partners:
cd3e
T-cell surface glycoprotein CD3 epsilon chain.
   
 0.897
cd247
T-cell surface glycoprotein CD3 zeta chain.
   
 0.851
I3KX32_ORENI
Ig-like domain-containing protein.
   
 0.677
syk
Tyrosine-protein kinase.
   
 0.553
LOC100696446
Tyrosine-protein kinase.
   
 0.553
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.514
LOC100695474
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.487
FDX1
Ferredoxin 1.
   
 0.455
fdx2
Ferredoxin 2.
   
 0.455
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.429
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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