STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kank2KN motif and ankyrin repeat domains 2. (1027 aa)    
Predicted Functional Partners:
Nprl3
NPR3-like, GATOR1 complex subunit.
      
 0.907
lcmt1
Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.
      
 0.828
KIF21A
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.818
LOC100692380
Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.818
LOC100691522
Dedicator of cytokinesis 6; Belongs to the DOCK family.
 
 
  
 0.809
LOC100703856
Rhomboid 5 homolog 1b (Drosophila).
      
 0.808
mgrn1
Mahogunin, ring finger 1b.
    
 
 0.773
Elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.746
spc24
SPC24 component of NDC80 kinetochore complex.
    
 0.720
LOC100704392
Rho GTPase activating protein 17.
      
 0.709
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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