STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692040Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (764 aa)    
Predicted Functional Partners:
I3JW49_ORENI
A-Raf proto-oncogene, serine/threonine kinase.
    
  0.893
LOC100711075
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
 0.886
rras2
RAS related 2.
   
 0.882
LOC100699786
RAS related.
   
 0.882
mras
Muscle RAS oncogene homolog.
   
 0.879
LOC100702054
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.878
hras
HRas proto-oncogene, GTPase a.
   
 0.877
GNG5
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
     
 0.874
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
   
 0.873
LOC100692028
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
 0.873
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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