STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkcshProtein kinase C substrate 80K-H. (530 aa)    
Predicted Functional Partners:
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
 0.991
gnptab
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
 0.962
LOC100691461
Calmegin.
   
 0.722
canx
Calnexin.
   
 0.722
sec63
SEC63 homolog, protein translocation regulator.
   
  
 0.706
recql
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.700
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.656
nagpa
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.571
LOC100691113
EF-hand domain-containing protein.
  
  
 
0.568
eif2ak1
Eukaryotic translation initiation factor 2-alpha kinase 1.
   
  
 0.563
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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