STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100712318Hyaluronan and proteoglycan link protein 2. (357 aa)    
Predicted Functional Partners:
Chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.703
LOC100695310
Carbohydrate sulfotransferase.
   
  
 0.507
LOC100705047
Carbohydrate sulfotransferase.
   
  
 0.507
Chst11
Carbohydrate sulfotransferase.
   
  
 0.499
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.493
LOC100692393
NIPA like domain containing 4.
      
 0.474
LOC100710928
Zgc:101583.
      
 0.474
Atp5mpl
6.8 kDa mitochondrial proteolipid.
      
 0.454
adamts8
ADAM metallopeptidase with thrombospondin type 1 motif, 15b.
      
 0.453
LOC100709915
Smoothelin, like.
      
 0.444
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.