LOC100707946 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC100707946

Uncharacterized protein. (1037 aa)

Predicted Functional Partners:

I3KP91_ORENI

0.957

MAPK8IP1

0.938

mapk8ip2

0.938

LOC100690324

0.927

Mapk8ip3

0.920

cdc42

0.795

pcnx3

0.757

htt

0.685

traf6

0.639

tab1

0.637

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3KP91_ORENI	LOC100690324	ENSONIP00000056370	ENSONIP00000081161	Mitogen-activated protein kinase kinase 7.	Mitogen-activated protein kinase 8 interacting protein 1.	0.976
I3KP91_ORENI	LOC100707946	ENSONIP00000056370	ENSONIP00000001939	Mitogen-activated protein kinase kinase 7.	Uncharacterized protein.	0.957
I3KP91_ORENI	MAPK8IP1	ENSONIP00000056370	ENSONIP00000042432	Mitogen-activated protein kinase kinase 7.	Mitogen-activated protein kinase 8 interacting protein 1.	0.988
I3KP91_ORENI	Mapk8ip3	ENSONIP00000056370	ENSONIP00000045965	Mitogen-activated protein kinase kinase 7.	Mitogen-activated protein kinase 8 interacting protein 3.	0.974
I3KP91_ORENI	cdc42	ENSONIP00000056370	ENSONIP00000037546	Mitogen-activated protein kinase kinase 7.	Cell division cycle 42.	0.933
I3KP91_ORENI	mapk8ip2	ENSONIP00000056370	ENSONIP00000045468	Mitogen-activated protein kinase kinase 7.	Mitogen-activated protein kinase 8 interacting protein 2.	0.988
I3KP91_ORENI	tab1	ENSONIP00000056370	ENSONIP00000079309	Mitogen-activated protein kinase kinase 7.	TGF-beta activated kinase 1/MAP3K7 binding protein 1.	0.933
I3KP91_ORENI	traf6	ENSONIP00000056370	ENSONIP00000057481	Mitogen-activated protein kinase kinase 7.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.626
LOC100690324	I3KP91_ORENI	ENSONIP00000081161	ENSONIP00000056370	Mitogen-activated protein kinase 8 interacting protein 1.	Mitogen-activated protein kinase kinase 7.	0.976
LOC100690324	LOC100707946	ENSONIP00000081161	ENSONIP00000001939	Mitogen-activated protein kinase 8 interacting protein 1.	Uncharacterized protein.	0.927
LOC100690324	MAPK8IP1	ENSONIP00000081161	ENSONIP00000042432	Mitogen-activated protein kinase 8 interacting protein 1.	Mitogen-activated protein kinase 8 interacting protein 1.	0.916
LOC100690324	Mapk8ip3	ENSONIP00000081161	ENSONIP00000045965	Mitogen-activated protein kinase 8 interacting protein 1.	Mitogen-activated protein kinase 8 interacting protein 3.	0.504
LOC100690324	mapk8ip2	ENSONIP00000081161	ENSONIP00000045468	Mitogen-activated protein kinase 8 interacting protein 1.	Mitogen-activated protein kinase 8 interacting protein 2.	0.916
LOC100707946	I3KP91_ORENI	ENSONIP00000001939	ENSONIP00000056370	Uncharacterized protein.	Mitogen-activated protein kinase kinase 7.	0.957
LOC100707946	LOC100690324	ENSONIP00000001939	ENSONIP00000081161	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 1.	0.927
LOC100707946	MAPK8IP1	ENSONIP00000001939	ENSONIP00000042432	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 1.	0.938
LOC100707946	Mapk8ip3	ENSONIP00000001939	ENSONIP00000045965	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 3.	0.920
LOC100707946	cdc42	ENSONIP00000001939	ENSONIP00000037546	Uncharacterized protein.	Cell division cycle 42.	0.795
LOC100707946	htt	ENSONIP00000001939	ENSONIP00000043030	Uncharacterized protein.	Huntingtin.	0.685
LOC100707946	mapk8ip2	ENSONIP00000001939	ENSONIP00000045468	Uncharacterized protein.	Mitogen-activated protein kinase 8 interacting protein 2.	0.938