Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Solute carrier family 39 member 1. (326 aa)    
Predicted Functional Partners:
I3JJ81_ORENI
Solute carrier family 39 member 7.
   
 0.844
SLC39A11
Solute carrier family 39 (zinc transporter), member 11.
   
 0.824
SLC39A12
Solute carrier family 39 member 12.
   
 0.801
slc39a4
ZIP4_domain domain-containing protein.
   
 0.801
slc39a8
Solute carrier family 39 member 8.
   
 0.788
slc39a9
Solute carrier family 39 member 9.
     
 0.767
Slc39a13
Solute carrier family 39 member 13.
   
 0.748
LOC100706809
Uncharacterized protein.
   
 0.703
LOC100705175
Solute carrier family 39 member 6.
   
 0.703
LOC100698478
Solute carrier family 39 member 14.
   
 0.703
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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