STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp19Ubiquitin specific peptidase 19. (1517 aa)    
Predicted Functional Partners:
I3IUU1_ORENI
Ring finger protein 123.
   
 0.781
usp7
Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.
   
0.710
usp14
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.691
usp30
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.646
usp28
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
   
 0.628
ENSONIP00000047919
Ubiquitin B.
    
 0.628
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.608
LOC100701610
Baculoviral IAP repeat containing 7.
    
 0.604
LOC100705328
Baculoviral IAP repeat containing 2.
    
 0.604
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.593
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.