Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
LOC100693776Nipsnap homolog 3A (C. elegans). (249 aa)    
Predicted Functional Partners:
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.732
ENSONIP00000040866
annotation not available
      
 0.633
Snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
  
 0.601
I3J608_ORENI
NBR1 autophagy cargo receptor b.
    
 
 0.591
nbr1
NBR1 autophagy cargo receptor a.
    
 
 0.591
camk2n2
Calcium/calmodulin-dependent protein kinase II inhibitor 2.
      
 0.555
rpp38
Ribonuclease P/MRP 38 subunit.
   
  
 0.525
utp15
UTP15 small subunit processome component.
   
    0.521
wdr6
WD repeat domain 6.
   
    0.521
nop56
NOP56 ribonucleoprotein homolog.
   
    0.520
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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