STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706507Laminin, beta 2-like. (1754 aa)    
Predicted Functional Partners:
lamc1
Laminin, gamma 1.
   
0.851
lamc2
Laminin subunit gamma 2.
   
0.851
LOC102077756
Laminin, gamma 3.
   
0.851
I3J3Z9_ORENI
Laminin, alpha 3.
   
 0.830
LAMA2
Laminin subunit alpha 2.
   
0.767
lama4
Laminin, alpha 4.
   
0.767
LAMA3
Laminin subunit alpha 3.
   
0.767
lama1
Laminin, alpha 1.
    
0.479
ENSONIP00000059519
annotation not available
    
 0.479
neo1
Neogenin 1b.
   
 0.461
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.