STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casp8ap2Uncharacterized protein. (1852 aa)    
Predicted Functional Partners:
lsm11
LSM11, U7 small nuclear RNA associated.
      
 0.593
LOC100694582
Nuclear protein, ataxia-telangiectasia locus.
   
 
 0.589
LOC109194206
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
    
 
 0.521
LOC100702139
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 
 0.521
gas2l3
Growth arrest-specific 2 like 3.
      
 0.489
sumo1
Small ubiquitin-related modifier.
    
  0.481
dscc1
DNA replication and sister chromatid cohesion 1.
      
 0.475
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.474
Gins2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.470
LOC100709670
Uncharacterized protein LOC100709670 isoform X1.
  
    0.467
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.