Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697099Zinc finger protein 292b. (2432 aa)    
Predicted Functional Partners:
ash1l
Uncharacterized protein.
   
 0.471
LOC100707110
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 0.471
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.469
I3JS81_ORENI
Ral GTPase activating protein, beta subunit (non-catalytic).
      
 0.462
foxn3
Checkpoint suppressor 1.
    
 0.450
I3KRF5_ORENI
Polymerase (DNA directed), lambda.
     
 0.428
klhl7
Kelch-like family member 7.
    
 0.425
Dclk3
Serine/threonine-protein kinase DCLK3 isoform X1.
    
 0.414
nkx1-1
NK1 transcription factor related 2-like,b.
    
 0.413
Wdfy3
WD repeat and FYVE domain containing 3.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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