STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100697045Phospholipase A and acyltransferase 1. (169 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
    
 0.863
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.787
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.786
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.765
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.763
bag3
BCL2 associated athanogene 3.
   
 0.704
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.664
ENSONIP00000000885
TSC complex subunit 1a.
   
 0.661
Hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.661
trap1
TNF receptor-associated protein 1.
   
 0.661
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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